Overview of Printer Calibration.
There are three main tasks you may need to carry out to fine-tune your PPA printer:
These instructions assume that you are already able to print postscript
files with your PPA printer.   If your print filters
are properly configured, something like "lpr test.ps" 
will successfully invoke ghostscript and pnm2ppa
to print the postscript file test.ps.   Alternatively, you may be using 
shell scripts like "lprbw", "lprcolor" 
and "lpreco" supplied with the
pnm2ppa source code, and modified by you for your defaults; you may also
have defined special printing devices in /etc/printcap, e.g.
a "coloreco" device so you print
with  lpr -P coloreco  test.ps.    These details vary with
the operating system and distribution you use.
(1) Centering the printed page on the paper.
This is done by adjusting the x-offset and y-offset parameters
xoffset and yoffset
in the pnm2ppa configuration file (usually
/etc/pnm2ppa.conf).   The parameters are given in units of
1/600 inch; increasing xoffset  moves the image
to the right, and increasing yoffset moves it downwards.
These offsets now have default values defined for each printer model,
and you will probably not need to adjust them.
Uncomment and make small adjustments to the default
values for these in the configuration file, until the printout is satisfactory.
(You can also  use the '-x' and '-y'
command-line parameters.)    
There are two ways to check the offsets.
calibrate_ppa" program.  
The "calibrate_ppa" program  is a
stand-alone program distributed with pnm2ppa which
creates various test patterns in the raw
pixmap  format accepted by pnm2ppa. (The three paper sizes,
US Letter,  US Legal, and A4, are supported).
If your paper size is A4, and your printer filter accepts
the "-l" (direct output) option to lpr, 
the command to run is:
 calibrate_ppa -s a4  --center  | pnm2ppa --bw  -i -  -o - | lpr -l
letter.)   
If "lpr -l" is not valid, you need to know  which port your
printer is attached to.   Assuming it is /dev/lp0, the above 
command becomes
 calibrate_ppa  -s a4 --center | pnm2ppa --bw  -i -  -o  /dev/lp0.
The pattern shows  distances from the edge of the printed page
in units of 50 dots (1/12 inch), and diagonal lines that should
point to the corners.  Change xoffset and yoffset
in the configuration file (usually /etc/pnm2ppa.conf
to center the pattern.    The configuration file is
supplied with commented-out entries like
#xoffset 160 showing the default value.  Remove
the "#" to activate the entry.
In Red Hat or Mandrake Linux distributions, a suitable test  page is 
/usr/lib/rhs/rhs-printfilters/testpage.ps
(US Letter paper) or
/usr/lib/rhs/rhs-printfilters/testpage-a4.ps
(A4 paper).   (If these are not available, similar test pages
are supplied in the pnm2ppa source  distribution.)
These pages have margins drawn at standard distances from the
edges of the paper, and can also be used to check the centering,
but are not as accurate
(2) Calibrating the X and Y Color Head Offsets.
The color ink offsets now have to be calibrated with respect to the black ink. Because the relative position of the two ink cartridges can move slightly, this must be done whenever an ink cartridge is removed and replaced.
To print an alignment calibration pattern on a4 paper, run
calibrate_ppa -s a4  --align | pnm2ppa --fd  -i - -o - | lpr -l
On the printed page, there are four alignment patterns, corresponding to configuration file parameters ColOffsX, ColOffsY, colorshear and blackshear. The central alignment patterns, labelled "0" should be perfectly aligned. If they are not, first correct the shearing patterns, (see below). Then identify the best-aligned ColOffsX and ColOffsY patterns, and add or subtract the positive or negative number below the pattern from the value in the configuration file.
Check the result by printing the alignment test pattern:
calibrate_ppa  --test | pnm2ppa -fd  -i - -o - | lpr -l
The calibration can also be done by printing the test page 
test.ps (found in the tarball
pnm2ppa-1.0.tar.gz; or installed 
with the pnm2ppa documentation. (This is often in 
/usr/doc/pnm2ppa*/.)
On the printout you see several images:
If these items do NOT line up, you should take the following steps:
Now you can print test.ps again to see whether this procedure worked.
Shearing adjustments
If bidirectional printing causes "shearing" of vertical lines (horizontal offsets of those parts of the line printed by left-to-right print-head sweeps relative to those printed on right-to-left sweeps) you can make small adjustments (in 1/600 inch) units using the blackshear and colorshear parameters in the configuration file. You can also suppress bidirectional printing with a unimode 1 configuration file entry.
The third and fourth lines on the color head offset calibration page 
(see above) correspond to color and black print head  shearing corrections. 
If the central alignment patterns  (labeled "0")
are not aligned,  add  or subtract the  positive or negative number
below the best-aligned pattern from the colorshear
and blackshear values in the configuration file.
Cleaning the Print Heads
You can use calibrate_ppa to clean the print heads by 
printing patterns that exercise  all the ink nozzles:
calibrate_ppa  --clean | pnm2ppa -p   -i - -o - | lpr -l
calibrate_ppa  --clean | pnm2ppa --bw  -i - -o - | lpr -l
Other adjustments
The parameter blackness adjusts the number of black ink drops printed per pixel. It takes values 1, 2, 3, or 4 (2 is the default). Other values, like 0, suppress black ink.
Inks can also be suppressed by configuration file
entries 
black_ink 0,
color_ink 0,
cyan_ink 0,
magenta_ink 0,
or yellow_ink 0.
These  are mainly useful for debugging
the printer driver.